BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G08SP1|AL429112
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1462 1737 0.0
>3x_Contig1462
Length = 8247
Score = 1737 bits (876), Expect = 0.0
Identities = 876/876 (100%)
Strand = Plus / Plus
Query: 1 gatcttgtctggctcagcgaattccttgacgactttaccgtcttgaacaatgacagcgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gatcttgtctggctcagcgaattccttgacgactttaccgtcttgaacaatgacagcgta 910
Query: 61 tctgatagatctgtcattaccgaaaatttgcttggagtcgaataaatggtcaccggcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tctgatagatctgtcattaccgaaaatttgcttggagtcgaataaatggtcaccggcctt 970
Query: 121 agcaaactcaccaagagtatcagcaatgattctgatatcgcttgggacacctagatcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 agcaaactcaccaagagtatcagcaatgattctgatatcgcttgggacacctagatcttc 1030
Query: 181 ggcccatgcttgagtaacgaaggaatcgttgacagcagtgacgaaaacttgcttgacacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ggcccatgcttgagtaacgaaggaatcgttgacagcagtgacgaaaacttgcttgacacc 1090
Query: 241 cttttccttcaattccttcaaatgagcaatgtaacctggcacatgagaggcagaacatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 cttttccttcaattccttcaaatgagcaatgtaacctggcacatgagaggcagaacatgc 1150
Query: 301 tggagagaatgctgctggcagaccaacgatgatgtacttaccgtgggcgacttctttacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 tggagagaatgctgctggcagaccaacgatgatgtacttaccgtgggcgacttctttacc 1210
Query: 361 caaatcgacggaatttccaggactagactcgtgtaaacctttcaaaccggttggaatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 caaatcgacggaatttccaggactagactcgtgtaaacctttcaaaccggttggaatgga 1270
Query: 421 gtcaccagctttgaaaagggttggggtaaaagtcttgaaacctctggttaaagatggctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gtcaccagctttgaaaagggttggggtaaaagtcttgaaacctctggttaaagatggctt 1330
Query: 481 gaacaatttagtagatagcattggtgattcggttaatttagcgttagtgacttgtagcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 gaacaatttagtagatagcattggtgattcggttaatttagcgttagtgacttgtagcaa 1390
Query: 541 ttgtacaggtgttaagtggcttaatttcccttttgttttcgagaaacaagtactggataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 ttgtacaggtgttaagtggcttaatttcccttttgttttcgagaaacaagtactggataa 1450
Query: 601 agggagaagttggagaaatgaacaatggcttctttttaaaggttttttgcttaagagaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 agggagaagttggagaaatgaacaatggcttctttttaaaggttttttgcttaagagaag 1510
Query: 661 tacatgaaataaagacagttcatattttgaccgacacaggtaaacggagtttgatagcta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 tacatgaaataaagacagttcatattttgaccgacacaggtaaacggagtttgatagcta 1570
Query: 721 gggctccataagattgtttcgaagcggtgtaactcgagagttggatgctcgattcataga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 gggctccataagattgtttcgaagcggtgtaactcgagagttggatgctcgattcataga 1630
Query: 781 cttgtatttaaaacatgtctgacgaagaggattatgcggaatatatgatgtccgaagagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 cttgtatttaaaacatgtctgacgaagaggattatgcggaatatatgatgtccgaagagg 1690
Query: 841 acatgagcagttttgagatggatgttgattcagatg 876
||||||||||||||||||||||||||||||||||||
Sbjct: 1691 acatgagcagttttgagatggatgttgattcagatg 1726
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5988
Number of Sequences: 1807
Number of extensions: 5988
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)